Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918576.1_cds_XP_016468008.1_60696
CDS Infomation

[gene=LOC107790577] [db_xref=GeneID:107790577] [protein=transcription factor bHLH110-like] [protein_id=XP_016468008.1] [location=complement(join(84221..84373,84630..84668,85111..85176,85920..85991,86365..86523,86995..87496,88204..88553))] [gbkey=CDS]
Sequence

ATGTCTGCAGAATGCACTCTTGAAAACTCGGATTTAACCACCAATAACAACAACCCCAAT
TTCTGCTTATTAACACAAAACTGGTGGCCACAGGACAATAATCCAATTTCTTCATGCAAT
ACCACTAGAAGCTCCAACTATTTATGGCAACAACAACAACAACAAGCAAACCATAATCAA
CAGTCATCAGATTCTTCCTCTTGTGAGGAAGATGTTCAAAATACTGCCACTAATAATCTT
CAACAATATCAGTTTCTACTTGGTGTTGATGATAACAGCACTTCTTTCATTTCTGGAGAA
ACCGCTGCGTCCTCTGATCACAACCACCTCATTTGGAGCCAACTCCTCCTAAGCAGCTCT
GCTAGTGAAACAGCTGGGAATATTAATACTAAAAATCTGTTGGAGAATAACAACCAAGAT
GCAATTTCAGAGATGAGTTTATTGGATGGAGCATCAACCTTAATCTCCTCTAAATCTCGT
TTTGACCATAATCAACTGGCTAATGATGATGATGACTACTTTCATCCCTACAGTAATCTT
CTTCTTGGAAGGCAAATTCATATTAATTATACAGATAATATTAATGCTATGGAACCTAGT
TCACATCAATACTGGAGACAAGGAGAAAATGGACATCAAGAAGTGAAATTGCCCAGACAT
CACTGTGGAATACTGCCACAAGTGGATAACTCATGTGCTGATGATATTAATTCAAGAAGC
TTTCCTGATTTTAATGTATCTTTTGGTAGCTATTTAAGCAAGCCATTGGTGGATACTTTC
AACGACTTTAAGCCAAGTCTGAAAACGTTGAATTTAGCACAACATAAAAAGCAAGGCCTC
CAACCATCTCTTACCAAGTCTCGGGGTACAAAATCAATATGCAGCACGTTGACAAGAAAC
GGAAGAGCACAAGAAATTCAAAGTGAAGGAAAAAAGAGGAGATCAGAAGATAATTCAGAC
ACAAACTCTAAAAGGCAAAAGATTGAAAGTTCGGCAGTTTCCTCTCCAAAGGTACAAGTC
CCAAAAGTGAAGCTTGCAGAAAAAATCACAGCTCTCCAACAAATTGTGTCACCATTTGGA
AAGACTGATACGGCATCCGTTCTGTGGGAAACAATCAACTATGTTAGATTCTTACAAGAG
CAAATACAGCTACTGAGCCATGCCTACATGAAGAGCAATACCTGCAAGGAACGCTGGGGA
GGATTTGACAGAAAAGACGTTGATCTGAGGAGTAGAGGTCTTTGTTTAGTACCAATTTCA
TGTACCCCTCAAATTTATCGTGAGAGTAACAATGGATCTGACTATTTGATCCCATCATAT
AGAGGATGCTTGTATAGATAA

Peptide Sequence

PEP ID

XP_016468008.1
PEP Infomation

PREDICTED: transcription factor bHLH110-like [Nicotiana tabacum]
Sequence

MSAECTLENSDLTTNNNNPNFCLLTQNWWPQDNNPISSCNTTRSSNYLWQQQQQQANHNQ
QSSDSSSCEEDVQNTATNNLQQYQFLLGVDDNSTSFISGETAASSDHNHLIWSQLLLSSS
ASETAGNINTKNLLENNNQDAISEMSLLDGASTLISSKSRFDHNQLANDDDDYFHPYSNL
LLGRQIHINYTDNINAMEPSSHQYWRQGENGHQEVKLPRHHCGILPQVDNSCADDINSRS
FPDFNVSFGSYLSKPLVDTFNDFKPSLKTLNLAQHKKQGLQPSLTKSRGTKSICSTLTRN
GRAQEIQSEGKKRRSEDNSDTNSKRQKIESSAVSSPKVQVPKVKLAEKITALQQIVSPFG
KTDTASVLWETINYVRFLQEQIQLLSHAYMKSNTCKERWGGFDRKDVDLRSRGLCLVPIS
CTPQIYRESNNGSDYLIPSYRGCLYR

Transcript Sequence

Gene sequence data has not been registered.